How do I export the consensus sequence from a DNA or Proetin multiple alignment?
Create or Open a Multiple Alignment file
Open, import or create a multiple sequence alignment file.
Set the desired theshold for the consensus in the "Side Panel".
Export the Consensus in FASTA format
Click File → Export → Consensus.
Set the format for the exported sequence and click Export.
Set the name of the exported consensus sequence.
Set the export location, then click Save to save the exported file to an appropriate location on your computer.